Abstract We consider the problem of dynamically allocating screening resources of different efficacies (e.g., magnetic or X-ray imaging) at checkpoints (e.g., at airports or ports) to successfully avert an attack by one of the screenees. Previously, the Threat Screening Game model was introduced to address this problem under the assumption that screenee arrival times are perfectly known. In reality, arrival times are uncertain, which severely impedes the implementability and performance of this approach. We thus propose a novel framework for dynamic allocation of threat screening resources that explicitly accounts for uncertainty in the screenee arrival times. We model the problem as a multistage robust optimization problem and propose a tractable solution approach using compact linear decision rules combined with robust reformulation and constraint randomization. We perform extensive numerical experiments which showcase that our approach outperforms (a) exact solution methods in terms of tractability, while incurring only a very minor loss in optimality, and (b) methods that ignore uncertainty in terms of both feasibility and optimality